Initial commit from Polytechnique Montreal

8 files changed, 953 insertions, 0 deletions

diff --git a/script/find_pylib.py b/script/find_pylib.py
new file mode 100755
index 0000000..3cb8420
--- /dev/null
+++ b/script/find_pylib.py
@@ -0,0 +1,11 @@
+#!/bin/env python3
+""" generation of pylib variable for use in Makefiles """
+
+from sysconfig import get_config_var
+pylib = get_config_var("LIBDIR")
+if pylib.find('lib64') >= 0:
+    print('lib64')
+elif pylib.find('lib') >= 0:
+    print('lib')
+else:
+    raise RuntimeError("find_pylib: doesn't contains lib substring")
diff --git a/script/install b/script/install
new file mode 100755
index 0000000..47dde47
--- /dev/null
+++ b/script/install
@@ -0,0 +1,579 @@
+#!/bin/sh
+#
+# author : R. Roy    (00-03-24)
+# update : E. Varin  (02-06-20)
+# update : A. Hebert (06-06-12)
+# use    : install [<compiler>] [-debug]
+# note   : please install ganlib and utilib before dragon/donjon
+#
+
+idebug=0
+mpi=0
+nbit=-m64
+optim=1
+compiler='custom'
+FoptCPP=''
+
+for param in $*
+do
+   case $param in
+      -debug) echo "Activate the debug environment variable"
+          idebug=1
+          ;;
+      -m32) echo "Compile in 32 bits"
+          nbit=-m32
+          ;;
+      -mpi) echo "Activate mpi"
+          mpi=1
+          FoptCPP="-DMPI"
+          ;;
+      -noopt) echo "Avoid -O optimization flag"
+          optim=0
+          ;;
+      *) compiler=$param
+          ;;
+   esac
+done
+
+LocDir=`pwd`
+Code=`basename "$LocDir"`
+#
+# Obtain system type:
+#
+System=`uname -s`
+Sysx="`echo $System | cut -b -6`"
+MACH=`uname -sm | sed 's/[ ]/_/'`
+if [ $Sysx = "CYGWIN" ]; then
+   System=`uname -o`
+   MACH=$System
+elif [ $Sysx = "AIX" ]; then
+   MACH=`uname -s`
+fi
+echo "System :" $System "   MACH :" $MACH
+if [ $System != "HP-UX" \
+  -a $System != "AIX"   \
+  -a $System != "Darwin" \
+  -a $System != "SunOS" \
+  -a $System != "Linux" \
+  -a $System != "Cygwin" ]; then
+	echo "Only Cygwin, Linux, AIX, Darwin, HP-UX and SunOS are allowed."
+	exit 1
+fi
+echo 'Configure' $Code 'on ' $MACH 'with' $compiler 'compiler'
+
+HomeDev=`pwd`/..
+if [ $compiler = "custom" ]; then
+   if [ $System = "AIX" ]; then
+      PATH=$PATH:/usr/vac/bin; export PATH
+      TMPDIR=/usr/tmp; export TMPDIR
+   elif [ $System = "SunOS" ]; then
+      PATH=$PATH:/lib; export PATH
+   fi
+   LocLib=${LocDir}/lib/"$MACH"
+   LocBin=${LocDir}/bin/"$MACH"
+   LocGanLib=$HomeDev/Ganlib/lib/"$MACH"
+   LocUtiLib=$HomeDev/Utilib/lib/"$MACH"
+   LocDrgLib=$HomeDev/Dragon/lib/"$MACH"
+   LocTriLib=$HomeDev/Trivac/lib/"$MACH"
+   LocDonLib=$HomeDev/Donjon/lib/"$MACH"
+   LocSkinLib=$HomeDev/Skin++/lib/"$MACH"
+else
+   if [ $System = "Linux" -a $compiler = 'absoft' ]; then
+      . /usr/local/absoft/bin/absoft.sh
+   fi
+   LocLib=${LocDir}/lib/"$MACH"'_'$compiler
+   LocBin=${LocDir}/bin/"$MACH"'_'$compiler
+   LocGanLib=$HomeDev/Ganlib/lib/"$MACH"'_'$compiler
+   LocUtiLib=$HomeDev/Utilib/lib/"$MACH"'_'$compiler
+   LocDrgLib=$HomeDev/Dragon/lib/"$MACH"'_'$compiler
+   LocTriLib=$HomeDev/Trivac/lib/"$MACH"'_'$compiler
+   LocDonLib=$HomeDev/Donjon/lib/"$MACH"'_'$compiler
+   LocSkinLib=$HomeDev/Skin++/lib/"$MACH"'_'$compiler
+fi
+#
+# Set compiler name
+#
+TOOLF="f77"    # Fortran 77 compiler
+TOOLC="cc"     # ANSI C compiler
+#
+# Set code name
+#
+Library=lib$Code.a
+Lnolib=`echo $Code | tr "[:lower:]" "[:upper:]"`.f
+Lnoobj=`echo $Code | tr "[:lower:]" "[:upper:]"`.o
+echo '--------------------'
+echo '--> Install' $Code
+echo '--------------------'
+echo 'Library =' $Library
+#
+# Make directories ./bin ./lib ./bin/"$MACH" and ./lib/"$MACH" if necessary
+#
+if [ $Code != "Utilib" ]; then
+if [ ! -d bin ]; then
+  mkdir bin
+  chmod 755 bin
+  mkdir "$LocBin"
+  chmod 755 "$LocBin"
+else
+  if [ ! -d "$LocBin" ]; then
+    mkdir "$LocBin"
+    chmod 755 "$LocBin"
+  else
+    if [ -f "$LocBin"/$Code ]; then
+      /bin/rm "$LocBin"/$Code
+    fi
+  fi
+fi
+fi
+if [ ! -d lib ]; then
+  mkdir lib
+  chmod 755 lib
+  mkdir "$LocLib"
+  chmod 755 "$LocLib"
+else
+  if [ ! -d "$LocLib" ]; then
+    mkdir "$LocLib"
+    chmod 755 "$LocLib"
+  else
+    if [ -f "$LocLib"/$Library ]; then
+      /bin/rm "$LocLib"/$Library
+    fi
+  fi
+fi
+if [ $Code = "Trivac" ]; then
+	echo "Installing Trivac"
+	if [ ! -f "$LocUtiLib"/libUtilib.a ]; then
+		echo "Please install Utilib first"
+		exit 1
+	fi
+	if [ ! -f "$LocGanLib"/libGanlib.a ]; then
+		echo "Please install Ganlib first"
+		exit 1
+	fi
+elif [ $Code = "Dragon" ]; then
+	echo "Installing Dragon"
+	if [ ! -f "$LocTriLib"/libTrivac.a ]; then
+		echo "Please install Trivac first"
+		exit 1
+	fi
+	if [ -d "$LocLib"/modules ]; then
+		/bin/rm "$LocLib"/modules/*
+	else
+		mkdir "$LocLib"/modules
+		chmod 755 "$LocLib"/modules
+	fi
+elif [ $Code = "Donjon" ]; then
+	echo "Installing Donjon"
+	if [ ! -f "$LocDrgLib"/libDragon.a ]; then
+		echo "Please install Dragon first"
+		exit 1
+	fi
+elif [ $Code = "Optex" ]; then
+	echo "Installing Optex"
+	if [ ! -f "$LocDonLib"/libDonjon.a ]; then
+		echo "Please install Donjon first"
+		exit 1
+	fi
+elif [ $Code = "Skin++" ]; then
+	echo "Installing Skin++"
+        Lnolib=`echo $Code.cxx`
+        Lnoobj=`echo $Code.o`
+        if [ -z "$BOOST_ROOT" ]; then
+                echo "Need to install Boost and to set BOOST_ROOT"
+                exit 1
+        elif [ ! -f "$LocDonLib"/libDonjon.a ]; then
+		echo "Please install Donjon first"
+		exit 1
+	fi
+elif [ $Code = "Yacs++" ]; then
+	echo "Installing Yacs++"
+        Lnolib=`echo $Code.cxx`
+        Lnoobj=`echo $Code.o`
+        if [ -z "$BOOST_ROOT" ]; then
+                echo "Need to install Boost and to set BOOST_ROOT"
+                exit 1
+        elif [ -z "$SALOME_KERNEL" ]; then
+                echo "Need to set SALOME_KERNEL"
+                exit 1
+        elif [ ! -f "$LocSkinLib"/libSkin++.a ]; then
+		echo "Please install Skin++ first"
+		exit 1
+	fi
+elif [ $Code = "Utilib" ]; then
+	echo "Installing Utilib"
+elif [ $Code = "Ganlib" ]; then
+	echo "Installing Ganlib"
+	if [ -d "$LocGanLib"/modules ]; then
+		/bin/rm "$LocGanLib"/modules/*
+	else
+		mkdir "$LocGanLib"/modules
+		chmod 755 "$LocGanLib"/modules
+	fi
+else
+	echo "Installing specific code " $Code
+	if [ ! -f "$LocDrgLib"/libDragon.a ]; then
+		echo "Please install Dragon first"
+		exit 1
+	fi
+	if [ -d "$LocLib"/modules ]; then
+		/bin/rm "$LocLib"/modules/*
+	else
+		mkdir "$LocLib"/modules
+		chmod 755 "$LocLib"/modules
+	fi
+fi
+echo 'Lnolib =' $Lnolib 'Lnoobj =' $Lnoobj
+#
+# Set cpp variables for Fortran and C
+#
+if [ $compiler = 'absoft' ]; then
+   FoptCPP="$FoptCPP -Dabsoft -DUnix"
+   CoptCPP="-Dabsoft"
+elif [ $compiler = 'g95' ]; then
+   FoptCPP="$FoptCPP -DLinux -DUnix -Dg95"
+   CoptCPP="-DLinux"
+elif [ $System = "HP-UX" ]; then
+   FoptCPP="$FoptCPP -DHPUX -DUnix"
+   CoptCPP="-DHPUX"
+elif [ $System = "AIX" ]; then
+   FoptCPP="$FoptCPP -DAIX -DUnix"
+   CoptCPP="-DAIX"
+elif [ $System = "SunOS" ]; then
+   FoptCPP="$FoptCPP -DF90 -DSunOS -DUnix"
+   CoptCPP="-DSunOS"
+else
+   FoptCPP="$FoptCPP -DLinux -DUnix"
+   CoptCPP="-DLinux"
+fi
+echo 'FoptCPP=' $FoptCPP
+echo 'CoptCPP=' $CoptCPP
+#
+# Lnoopt= list the non-optimized routines
+#
+Lnoopt=
+CoptF="-c -Wall $nbit -fPIC"
+CoptL="$nbit"
+CoptC="-c -Wall $nbit -fPIC"
+CAddoptF=' '
+CAoptF90=' '
+CXXLINK="-lstdc++"
+if [ $compiler = 'absoft' ]; then
+        CoptF="-c -fPIC"
+        CoptL="$nbit"
+        TOOLF="f90"
+        TOOLC="gcc -fPIC"
+        TOOLCXX="g++"
+        CAddoptF="-f"
+        CAoptF90="-c -f free"
+        if [ "`uname -m`" = "i386" -o "`uname -m`" = "x86_64" ]; then
+                CAoptF90="-c $nbit -f free"
+		CAddoptF="$nbit -f"
+		CoptC="-c $nbit"
+        fi
+elif [ $compiler = 'g95' ]; then
+        CoptF="-c"
+        TOOLF="g95"
+        TOOLC="gcc"
+        TOOLCXX="g++"
+	CAddoptF="-ffixed-line-length-80 -fsloppy-char -Wno-globals"
+        CoptC="-c -fPIC"
+        CAoptF90="-c -fsloppy-char -Wno-globals"
+elif [ $compiler = 'intel' ]; then
+        FoptCPP="$FoptCPP -Difort"
+        CoptL="$nbit"
+        CoptF="-c -fPIC"
+        TOOLF="ifort"
+        TOOLC="gcc"
+        TOOLCXX="g++"
+        CAoptF90="-c"
+        CoptC="-c $nbit -fPIC"
+        CXXLINK="-lstdc++ -nofor_main"
+elif [ $System = "HP-UX" ]; then
+        Cnoopt="-c +Onolimit"
+        CAoptF90="+source=free"
+elif [ $System = "AIX" ]; then
+        TOOLF="xlf90"
+        CoptF="-c"
+        CoptC="-c"
+        CoptL="-bmaxdata:0x80000000 -qipa"
+        CAddoptF="-qmaxmem=-1 -qxlf77=leadzero -qfixed"
+        CAoptF90="-qmaxmem=-1 -qsuffix=f=f90"
+elif [ $System = "SunOS" ]; then
+        TOOLF="f90"
+        TOOLC="cc"
+        CoptF="-c -m64"
+        CoptC="-c -m64"
+        CAddoptF="-s -ftrap=%none"
+        CAoptF90="-s -ftrap=%none"
+else
+        if [ $mpi = 1 ]; then
+            TOOLF="mpif90"
+            TOOLC="mpicc"
+        else
+            TOOLF="gfortran"
+            TOOLC="gcc"
+        fi
+        TOOLCXX="g++"
+        CAddoptF="-frecord-marker=4"
+        CAoptF90=" "
+        vers=$(uname -r | cut -d"." -f1)
+        if [ "$MACH" = "Darwin_i386" ]; then
+                gccrel=`g++ --version | head -1 | sed -e 's/i686-apple-darwin\([0-9]*\).*/\1/'`
+                gccfullV=`g++ --version | head -1 | sed -e '1 s/.*\([0-9]\.[0-9]\.[0-9]\).*/\1/'`
+                CXXLINK="-L/usr/lib/gcc/i686-apple-darwin$gccrel/$gccfullV -lstdc++"
+                echo "reset CXXLINK to" $CXXLINK
+        elif [ "$MACH" = "Darwin_x86_64" -a "$vers" -gt 15 ]; then
+                CXXLINK="-lc++"
+                echo "reset CXXLINK to" $CXXLINK
+        fi
+fi
+#
+# Set debug flag
+#
+if [ $idebug = 1 ]; then
+        CoptF=`echo $CoptF -g`
+        FoptCPP=`echo $FoptCPP -g`
+        CoptCPP=`echo $CoptCPP -g`
+fi
+#
+# Set optimization
+#
+if [ $optim = 1 -a $idebug = 0 ]; then
+        if [ $System = "AIX" ]; then
+          CoptF=`echo $CoptF -O4 -qstrict`
+          CoptC=`echo $CoptC -O4 -qstrict`
+        else
+          CoptF=`echo $CoptF -O`
+          CoptC=`echo $CoptC -O`
+        fi
+        CoptL=`echo $CoptL -O`
+fi
+#
+Directory=src
+echo "Directory:" $Directory
+cd $Directory
+if [ $Code = "Ganlib" ]; then
+  command -v python3
+  OUT=$?
+  if [ $OUT -eq 0 ]; then
+    echo "use python3"
+    L90="`python3 ../../script/make_depend_py3.py` `*.F90`"
+  else
+    echo "use python2"
+    L90="`python ../../script/make_depend.py` `*.F90`"
+  fi
+  liste="$L90 `ls *.f` `ls *.F` `ls *.c`"
+  LF="`ls *.F`"
+  LF90="`ls *.F90`"
+  Lcc="`ls *.c`"
+  echo "cc rout  :" $Lcc
+  echo "F rout  :" $LF
+  echo "F90 rout  :" $LF90
+elif [ $Code = "Utilib" -o $Code = "Donjon" -o $Code = "Trivac" -o $Code = "Dragon" -o $Code = "Optex" ]; then
+  command -v python3
+  OUT=$?
+  if [ $OUT -eq 0 ]; then
+    echo "use python3"
+    L90="`python3 ../../script/make_depend_py3.py`"
+  else
+    echo "use python2"
+    L90="`python ../../script/make_depend.py`"
+  fi
+  liste="$L90 `ls *.f` `ls *.F` `ls *.c`"
+  Lcc="`ls *.c`"
+  echo "cc rout  :" $Lcc
+elif [ $Code = "Skin++" -o $Code = "Yacs++" ]; then
+  Lcxx="`ls *.cxx`"
+  liste="$Lcxx"
+  echo "c++ rout  :" $Lcxx
+else
+  echo "Unknown code  :" $Code
+fi
+echo "No opti  :" $Lnoopt
+echo "--------- "
+Lo=
+Lon=
+for routname in $liste; do
+	InLib="Yes"
+	for routnolib in $Lnolib; do
+		if [ $routname = $routnolib ]; then
+			Nlib="`echo $routname | cut -d. -f 1`.o"
+			Lon="$Lon $Nlib"
+			InLib="No"
+		fi
+	done
+	OptIt="Yes"
+	for routnoopt in $Lnoopt; do
+		if [ $routname = $routnoopt ]; then
+			OptIt="No"
+                        echo "Compilei  :" $TOOLF $Cnoopt $routnoopt -I"$LocGanLib"/modules/
+			$TOOLF $Cnoopt $routnoopt -I"$LocGanLib"/modules/
+		fi
+	done
+	for routcc in $Lcc; do
+		if [ $routname = $routcc ]; then
+			OptIt="No"
+			echo "Compile  :" $TOOLC $CoptC $CoptCPP $routcc
+			$TOOLC $CoptC $CoptCPP $routcc
+		fi
+	done
+	for routF in $LF; do
+		if [ $routname = $routF ]; then
+			OptIt="No"
+                        if [ $mpi = 0 -a $routname = 'DRVMPI.F' ]; then
+			      InLib="No"
+                              continue ;
+                        elif [ $mpi = 0 -a $routname = 'SNDMPI.F' ]; then
+			      InLib="No"
+                              continue ;
+                        fi
+		        echo "cpp+Compile  :"  $TOOLF $CoptF $FoptCPP $CAddoptF $routF -I"$LocGanLib"/modules/
+                        objname="`echo $routF | cut -d. -f 1`.o"
+		        cpp -P -W -traditional $FoptCPP -I/usr/local/include $routF temp.f
+		        $TOOLF $CoptF $CAddoptF temp.f -I"$LocGanLib"/modules/ -o $objname
+                        /bin/rm temp.f
+		fi
+	done
+	for routF90 in $LF90; do
+		if [ $routname = $routF90 ]; then
+			OptIt="No"
+		        echo "cpp+Compile  :"  $TOOLF $CoptF $FoptCPP $CAoptF90 $routF90 -I"$LocGanLib"/modules/
+                        objname="`echo $routF90 | cut -d. -f 1`.o"
+		        cpp -P -W -traditional $FoptCPP -I/usr/local/include $routF90 temp.f90
+		        $TOOLF $CoptF $CAoptF90 temp.f90 -I"$LocGanLib"/modules/ -o $objname
+                        /bin/rm temp.f90
+		fi
+	done
+	if [ $OptIt = "Yes" ]; then
+	        for rout90 in $L90; do
+                        if [ $routname = $rout90 ]; then
+                                OptIt="No"
+                                echo "Compile  :" $TOOLF $CoptF $CAoptF90 $rout90 -I"$LocGanLib"/modules/
+                                $TOOLF $CoptF $CAoptF90 $rout90 -I"$LocGanLib"/modules/
+                        fi
+                done
+	fi
+	for routcc in $Lcxx; do
+		if [ $routname = $routcc -a $Code = "Yacs++" ]; then
+			OptIt="No"
+			echo "Compile  :" $TOOLCXX $CoptC $CoptCPP $routcc -I$BOOST_ROOT -I"$HomeDev"/Ganlib/src/ \
+                        -I"$HomeDev"/Skin++/src/ -I"$SALOME_KERNEL"/include/salome/
+			$TOOLCXX $CoptC $CoptCPP $routcc -I$BOOST_ROOT -I"$HomeDev"/Ganlib/src/ \
+                        -I"$HomeDev"/Skin++/src/ -I"$SALOME_KERNEL"/include/salome/
+	        elif [ $routname = $routcc ]; then
+			OptIt="No"
+			echo "Compile  :" $TOOLCXX $CoptC $CoptCPP $routcc -I$BOOST_ROOT -I"$HomeDev"/Ganlib/src/
+			$TOOLCXX $CoptC $CoptCPP $routcc -I$BOOST_ROOT -I"$HomeDev"/Ganlib/src/
+		fi
+	done
+	if [ $OptIt = "Yes" ]; then
+		echo "Compile  :"  $TOOLF $CoptF $CAddoptF $routname -I"$LocGanLib"/modules/
+		$TOOLF $CoptF $CAddoptF $routname -I"$LocGanLib"/modules/
+	fi
+	if [ $InLib = "Yes" ]; then
+		Nlib="`echo $routname | cut -d. -f 1`.o"
+		Lo="$Lo $Nlib"
+	fi
+done
+echo "--------- "
+if [ $System = "SunOS" ]; then
+    /usr/ccs/bin/ar cr $Library $Lo
+else
+    ar cr $Library $Lo
+    ranlib $Library
+fi
+for routnolib in $Lon; do
+	cp $routnolib "$LocLib"/$routnolib
+	chmod 644 "$LocLib"/$routnolib
+	echo "Install  : File   " "$LocLib"/$routnolib "was produced"
+done
+if [ -f $Library ]; then
+	echo "Install  : Library" "$LocLib"/$Library "was produced"
+	mv $Library "$LocLib"
+	chmod 644 "$LocLib"/$Library
+	if [ $Code = "Utilib" ]; then
+		echo "No link performed for Utilib"
+	elif [ $Code = "Ganlib" ]; then
+                Lnoobj="GANMAIN.o"
+		echo "Link :"  $TOOLF $CoptL $Lnoobj
+		echo "      "  "$LocLib"/$Library
+		echo "      "  -o "$LocBin"/$Code
+		$TOOLF $CoptL GANMAIN.o "$LocLib"/$Library -o "$LocBin"/$Code
+		mv *.mod "$LocLib"/modules
+		chmod 644 "$LocLib"/modules/*.mod
+	elif [ $Code = "Trivac" ]; then
+		echo "Link :"  $TOOLF $CoptL $Lnoobj
+		echo "      "  "$LocLib"/$Library
+		echo "      "  "$LocUtiLib"/libUtilib.a
+		echo "      "  "$LocGanLib"/libGanlib.a
+		echo "      "  -o "$LocBin"/$Code
+		$TOOLF $CoptL $Lnoobj "$LocLib"/$Library "$LocUtiLib"/libUtilib.a "$LocGanLib"/libGanlib.a \
+		-o "$LocBin"/$Code
+	elif [ $Code = "Dragon" ]; then
+		echo "Link :"  $TOOLF $CoptL $Lnoobj
+		echo "      "  "$LocLib"/$Library
+		echo "      "  "$LocTriLib"/libTrivac.a
+		echo "      "  "$LocUtiLib"/libUtilib.a
+		echo "      "  "$LocGanLib"/libGanlib.a
+		echo "      "  -o "$LocBin"/$Code
+		$TOOLF $CoptL $Lnoobj "$LocLib"/$Library "$LocTriLib"/libTrivac.a "$LocUtiLib"/libUtilib.a \
+                "$LocGanLib"/libGanlib.a -o "$LocBin"/$Code
+		mv *.mod "$LocLib"/modules
+		chmod 644 "$LocLib"/modules/*.mod
+	elif [ $Code = "Donjon" ]; then
+		echo "Link :"  $TOOLF $CoptL $Lnoobj
+		echo "      "  "$LocLib"/$Library
+		echo "      "  "$LocTriLib"/libTrivac.a
+		echo "      "  "$LocDrgLib"/libDragon.a
+		echo "      "  "$LocUtiLib"/libUtilib.a
+		echo "      "  "$LocGanLib"/libGanlib.a
+		echo "      "  -o "$LocBin"/$Code
+		$TOOLF $CoptL $Lnoobj "$LocLib"/$Library "$LocDrgLib"/libDragon.a "$LocTriLib"/libTrivac.a \
+		"$LocDrgLib"/libDragon.a "$LocUtiLib"/libUtilib.a "$LocGanLib"/libGanlib.a -o "$LocBin"/$Code
+	elif [ $Code = "Optex" ]; then
+		echo "Link :"  $TOOLF $CoptL $Lnoobj
+		echo "      "  "$LocLib"/$Library
+		echo "      "  "$LocTriLib"/libTrivac.a
+		echo "      "  "$LocDrgLib"/libDragon.a
+		echo "      "  "$LocDonLib"/libDonjon.a
+		echo "      "  "$LocUtiLib"/libUtilib.a
+		echo "      "  "$LocGanLib"/libGanlib.a
+		echo "      "  -o "$LocBin"/$Code
+		$TOOLF $CoptL $Lnoobj "$LocLib"/$Library "$LocDonLib"/libDonjon.a "$LocDrgLib"/libDragon.a \
+	        "$LocTriLib"/libTrivac.a "$LocDrgLib"/libDragon.a "$LocUtiLib"/libUtilib.a "$LocGanLib"/libGanlib.a \
+                -o "$LocBin"/$Code
+	elif [ $Code = "Skin++" ]; then
+		echo "Link :"  $TOOLF $CoptL $Lnoobj
+		echo "      "  "$LocLib"/$Library
+		echo "      "  "$LocDonLib"/libDonjon.a
+		echo "      "  "$LocDrgLib"/libDragon.a
+		echo "      "  "$LocTriLib"/libTrivac.a
+		echo "      "  "$LocUtiLib"/libUtilib.a
+		echo "      "  "$LocGanLib"/libGanlib.a
+		echo "      "  $CXXLINK -o "$LocBin"/$Code
+		$TOOLF $CoptL $Lnoobj "$LocLib"/$Library "$LocDonLib"/libDonjon.a "$LocDrgLib"/libDragon.a \
+	        "$LocTriLib"/libTrivac.a "$LocDrgLib"/libDragon.a "$LocUtiLib"/libUtilib.a "$LocGanLib"/libGanlib.a \
+                $CXXLINK -o "$LocBin"/$Code
+	elif [ $Code = "Yacs++" ]; then
+		echo "No link performed for Yacs++"
+        else
+                echo "Unknown code" $Code
+	fi
+	if [ $Code = "Utilib" -o $Code = "Yacs++" ]; then
+		/bin/rm *.o
+        else
+		if [ -x "$LocBin"/$Code ]; then
+			echo "Install  : Exec   " "$LocBin"/$Code "was produced"
+			/bin/rm *.o
+        		chmod 755 "$LocBin"/$Code
+			echo "Install  : DONE"
+		else
+			echo "Install  : Exec   " "$LocBin"/$Code "was NOT produced"
+			echo "Install  : ERROR"
+		fi
+	fi
+else
+	echo "Install  : Library" "$LocLib"/$Library "was NOT produced"
+	echo "Install  : ERROR"
+fi
+cd "$LocDir"
diff --git a/script/instver5.bat b/script/instver5.bat
new file mode 100755
index 0000000..544c89f
--- /dev/null
+++ b/script/instver5.bat
@@ -0,0 +1,122 @@
+rem *********************************************************************************

+rem   Script to compile and link Version4 components on MS-DOS

+rem   compile with intel Fortran and intel C++

+rem   run the script in Dos windows from Visual studio command prompt

+rem   execute script from Version4 directory as .\script\instver5

+rem   base on a script created by E. Varin for Dragon 3.06

+rem *********************************************************************************

+rem ----compile utilib----

+cd Utilib

+md lib\ms-dos

+copy src\*.* lib\ms-dos\

+cd lib\ms-dos\

+ifort /c /assume:byterecl /warn:nofileopt *.f 1>OUT 2>&1

+rem make utilib library

+lib /nologo /out:utilib.lib *.obj

+del *.obj *.f

+cd ..\..\..

+rem ----------------------

+rem ----compile ganlib----

+cd Ganlib

+md lib\ms-dos

+copy src\*.* lib\ms-dos\

+cd lib\ms-dos\

+rem ren KDRCPU.F KDRCPU.fpp

+rem ren KDROPN.F KDROPN.fpp

+rem ren KDRSTD.F KDRSTD.fpp

+ren DRVMPI.F DRVMPI.fpp

+ren SNDMPI.F SNDMPI.fpp

+ifort /c /DMSDOS /assume:byterecl /warn:nofileopt FILMODx.f90  1>XOUT0 2>&1

+ifort /c /DMSDOS /assume:byterecl /warn:nofileopt GANLIBx.f90  1>XOUT1 2>&1

+ifort /c /DMSDOS /assume:byterecl /warn:nofileopt *.f *.fpp *.f90  1>XOUT2 2>&1

+cl /c /DMSDOS *.c

+rem make ganlib library

+move ganmain.obj ..\

+lib /nologo /out:ganlib.lib *.obj

+del *.obj *.f *.f90 *.fpp *.c *.h

+move ..\ganmain.obj .

+cd ..\..

+rem make ganlib executable

+md bin\ms-dos

+cd bin\ms-dos\

+rem

+ifort -o ganlib.exe ..\..\lib\ms-dos\ganmain.obj ..\..\lib\ms-dos\ganlib.lib ^

+   ..\..\..\Utilib\lib\ms-dos\utilib.lib 1>XOUT3 2>&1

+cd ..\..\..

+rem ----------------------

+rem ----compile trivac----

+cd Trivac

+md lib\ms-dos

+copy src\*.* lib\ms-dos\

+cd lib\ms-dos\

+copy ..\..\..\ganlib\src\filmod.f90 filmod.f90

+copy ..\..\..\ganlib\src\ganlib.f90 ganlib.f90

+ifort /c /DMSDOS /assume:byterecl /warn:nofileopt filmod.f90  1>OUT0 2>&1

+ifort /c /DMSDOS /assume:byterecl /warn:nofileopt ganlib.f90  1>OUT1 2>&1

+ifort /c /assume:byterecl /warn:nofileopt *.f90 *.f 1>OUT2 2>&1

+rem make trivac library

+move trivac.obj ..\

+lib /nologo /out:trivac.lib *.obj >OUT3

+del *.obj *.f *.f90

+move ..\trivac.obj .

+cd ..\..

+rem make trivac executable

+md bin\ms-dos

+cd bin\ms-dos\

+ifort -o trivac.exe ..\..\lib\ms-dos\trivac.obj ..\..\lib\ms-dos\trivac.lib ^

+   ..\..\..\Ganlib\lib\ms-dos\ganlib.lib ..\..\..\Utilib\lib\ms-dos\utilib.lib ^

+   1>OUT3 2>&1

+cd ..\..\..

+rem ----------------------

+rem ----compile dragon----

+cd Dragon

+md lib\ms-dos

+copy src\*.* lib\ms-dos\

+cd lib\ms-dos\

+copy ..\..\..\ganlib\src\filmod.f90 filmod.f90

+copy ..\..\..\ganlib\src\ganlib.f90 ganlib.f90

+rem ren DRAGON.F DRAGON.fpp

+ifort /c /DMSDOS /assume:byterecl /warn:nofileopt filmod.f90  1>OUT0 2>&1

+ifort /c /DMSDOS /assume:byterecl /warn:nofileopt ganlib.f90  1>OUT1 2>&1

+ifort /c /assume:byterecl /warn:nofileopt *.f90 *.f 1>OUT2 2>&1

+cl /c /DMSDOS *.c   1>OUT3 2>&1

+rem make dragon library

+move dragon.obj ..\

+lib /nologo /out:dragon.lib *.obj  1>OUT4 2>&1

+del *.obj *.f90 *.f *.c *.h

+move ..\dragon.obj .

+cd ..\..

+rem make dragon executable

+md bin\ms-dos

+cd bin\ms-dos\

+ifort -o dragon.exe ..\..\lib\ms-dos\dragon.obj ..\..\lib\ms-dos\dragon.lib ^

+   ..\..\..\Trivac\lib\ms-dos\trivac.lib ..\..\..\Ganlib\lib\ms-dos\ganlib.lib ^

+   ..\..\..\Utilib\lib\ms-dos\utilib.lib  1>OUT4 2>&1

+cd ..\..\..

+rem ----------------------

+rem ----compile donjon----

+cd Donjon

+md lib\ms-dos

+copy src\*.* lib\ms-dos\

+cd lib\ms-dos\

+rem ren DONJON.F DONJON.fpp

+copy ..\..\..\ganlib\src\filmod.f90 filmod.f90

+copy ..\..\..\ganlib\src\ganlib.f90 ganlib.f90

+ifort /c /DMSDOS /assume:byterecl /warn:nofileopt filmod.f90  1>OUT0 2>&1

+ifort /c /DMSDOS /assume:byterecl /warn:nofileopt ganlib.f90  1>OUT1 2>&1

+ifort /c /assume:byterecl /warn:nofileopt *.f90 *.f 1>OUT2 2>&1

+cl /c /DMSDOS *.c  1>OUT3 2>&1

+rem make donjon library

+move donjon.obj ..\

+lib /nologo /out:donjon.lib *.obj  1>OUT4 2>&1

+del *.obj *.f90 *.f *.c *.h

+move ..\donjon.obj .

+cd ..\..

+rem make donjon executable

+md bin\ms-dos

+cd bin\ms-dos\

+ifort -o donjon.exe ..\..\lib\ms-dos\donjon.obj ..\..\lib\ms-dos\donjon.lib ^

+   ..\..\..\Dragon\lib\ms-dos\dragon.lib ..\..\..\Trivac\lib\ms-dos\trivac.lib ^

+   ..\..\..\Ganlib\lib\ms-dos\ganlib.lib ..\..\..\Utilib\lib\ms-dos\utilib.lib ^

+    1>OUT4 2>&1

+cd ..\..\..

diff --git a/script/make_depend.py b/script/make_depend.py
new file mode 100755
index 0000000..15c656e
--- /dev/null
+++ b/script/make_depend.py
@@ -0,0 +1,57 @@
+#!/bin/env python
+""" generation of module dependances for a xxx.f90 or xxx.F90 file """
+
+import string,sys
+from subprocess import Popen, PIPE
+
+def noComment(mot):
+    """ remove comment characters in a word """
+    ind= string.find(mot,'!')
+    if ind != -1:
+        mot= mot[:ind]
+    return mot
+
+class md9:
+    """ a file, its module and its dependances """
+    def __init__(self,fic):
+        self.name= fic
+        self.used= []
+        #find all module dependances
+        listeLignes= open(self.name,'r').readlines()
+        self.module= "dummy"
+        for ligne in listeLignes:
+            ligne= string.lower(ligne)
+            if string.count(ligne,'use'):
+                ligne= string.replace(ligne,',',' ')
+                listeMots= string.split(ligne)
+                if listeMots[0] == 'use':
+                    mod= noComment(listeMots[1])
+                    if mod not in self.used and mod != 'intrinsic':
+                        self.used.append(mod)
+            elif string.count(ligne,'module'):
+                listeMots= string.split(ligne)
+                if listeMots[0] == 'module' and \
+                   noComment(listeMots[1]) != 'procedure':
+                    self.module= listeMots[1]
+    def utilise(self,other):
+        return (other.module in self.used)
+
+listeClasse= list()
+for x in sys.argv[1:]:
+    if x.endswith('.f90') or x.endswith('.F90') : listeClasse.append(md9(x))
+#sort the file list
+listeRes= []
+while listeClasse:
+    lgav= len(listeClasse)
+    for fic in listeClasse:
+        if len(filter(lambda x,y=fic:y.utilise(x),listeClasse)) == 0:
+            listeRes.append(fic)
+            listeClasse.remove(fic)
+    lgap= len(listeClasse)
+    if lgav == lgap and lgap != 0:
+        raise RuntimeError("make_depend: cross-references found")
+#result output
+resstr=''
+for fic in listeRes:
+    resstr=resstr+fic.name+' '
+print resstr
diff --git a/script/make_depend_py3.py b/script/make_depend_py3.py
new file mode 100755
index 0000000..a47d7fb
--- /dev/null
+++ b/script/make_depend_py3.py
@@ -0,0 +1,58 @@
+#!/bin/env python3
+""" generation of module dependances for a xxx.f90 or xxx.F90 file """
+
+import string,sys
+from subprocess import Popen, PIPE
+
+def noComment(mot):
+    """ remove comment characters in a word """
+    ind= mot.find('!')
+    if ind != -1:
+        mot= mot[:ind]
+    return mot
+
+class md9:
+    """ a file, its module and its dependances """
+    def __init__(self,fic):
+        self.name= fic
+        self.used= []
+        #find all module dependances
+        listeLignes= open(self.name,'r',encoding='utf8',errors='ignore').readlines()
+        self.module= "dummy"
+        for ligne in listeLignes:
+            ligne= ligne.lower()
+            if ligne.count('use'):
+                ligne= ligne.replace(',',' ')
+                listeMots= ligne.split()
+                if listeMots[0] == 'use':
+                    mod= noComment(listeMots[1])
+                    if mod not in self.used and mod != 'intrinsic':
+                        self.used.append(mod)
+            elif ligne.count('module'):
+                listeMots= ligne.split()
+                if listeMots[0] == 'module' and \
+                   noComment(listeMots[1]) != 'procedure':
+                    self.module= listeMots[1]
+    def utilise(self,other):
+        return (other.module in self.used)
+
+#list the file names
+listeClasse= list()
+for x in sys.argv[1:]:
+    if x.endswith('.f90') or x.endswith('.F90'): listeClasse.append(md9(x))
+#sort the file list
+listeRes= []
+while listeClasse:
+    lgav= len(listeClasse)
+    for fic in listeClasse:
+        if len(list(filter(lambda x,y=fic:y.utilise(x),listeClasse))) == 0:
+            listeRes.append(fic)
+            listeClasse.remove(fic)
+    lgap= len(listeClasse)
+    if lgav == lgap and lgap != 0:
+        raise RuntimeError("make_depend: cross-references found")
+#result output
+resstr=''
+for fic in listeRes:
+    resstr=resstr+fic.name+' '
+print(resstr)
diff --git a/script/post-commit b/script/post-commit
new file mode 100755
index 0000000..41fe508
--- /dev/null
+++ b/script/post-commit
@@ -0,0 +1,54 @@
+#!/usr/bin/python3
+"""
+Subversion post-commit hook which copy (append) the issue-tracking information
+to a new (or existing) card-index in the /issues/ directory. A commit of this
+information is performed.
+"""
+#Author: Alain Hebert, Ecole Polytechnique, 2006.
+
+import os, sys, pysvn, time
+
+def main(repos, rev):
+  # Recover the revision data:
+  client = pysvn.Client()
+  log_message=client.log('file://' + repos + '', discover_changed_paths=True, \
+  revision_end=pysvn.Revision(pysvn.opt_revision_kind.number, rev))
+  message = str(log_message[0]['message'])
+  if message[11:] != ': Issue-tracking commit' and message[11:] != ':':
+    # Recover the existing card-index
+    fileName = str(log_message[0]['message'])[:11]
+    if os.path.isdir('/tmp/post-issues'):
+      os.system("chmod -R 777 /tmp/post-issues/")
+      os.system("rm -r /tmp/post-issues/")
+    myls = client.ls('file://'+repos+'/'+'/issues/')
+    myls2 = []
+    for k in range(len(myls)):
+      myls2.append(str(myls[k]['name']).split('/')[-1])
+    client.checkout('file://'+repos+'/'+'/issues/','/tmp/post-issues/',recurse=False)
+    if fileName in myls2:
+      # Recover the existing card-index and open it
+      f = open('/tmp/post-issues/'+fileName, 'a')
+    else:
+      # Create a new card-index
+      f = open('/tmp/post-issues/'+fileName, 'w')
+      f.write('Card-index: '+fileName+'\n')
+      f.write('---------------------------------------------------------\n')
+      client.add('/tmp/post-issues/'+fileName)
+    f.write(str(log_message[0]['author'])+'\n')
+    f.write(time.ctime(log_message[0]['date'])+'\n')
+    f.write('subversion revision=%d\n'%log_message[0]['revision'].number)
+    f.write(message+'\n')
+    for cpath in log_message[0]['changed_paths']:
+      f.write(cpath['action']+' '+cpath['path']+'\n')
+    f.write('---------------------------------------------------------\n')
+    f.close()
+    #committing the issue-tracking card-index to the repository
+    client.cleanup('/tmp/post-issues/')
+    client.checkin(['/tmp/post-issues/'], fileName+': Issue-tracking commit')
+    os.system("rm -r -f /tmp/post-issues/")
+
+if __name__ == '__main__':
+  if len(sys.argv) < 3:
+    sys.stderr.write("Usage: %s repos rev\n" % (sys.argv[0]))
+  else:
+    main(sys.argv[1], sys.argv[2])
diff --git a/script/pre-commit b/script/pre-commit
new file mode 100755
index 0000000..2d9e8b9
--- /dev/null
+++ b/script/pre-commit
@@ -0,0 +1,46 @@
+#!/usr/bin/python3
+"""
+Subversion pre-commit hook which currently checks that the card-index
+information is consistent and correctly given.
+"""
+#Author: Alain Hebert, Ecole Polytechnique, 2006.
+
+import os, sys, pysvn
+
+def main(repos, txn):
+  # Recover the transaction data:
+  print("pre-commit: repos=",repos)
+  t = pysvn.Transaction( repos, txn )
+  all_props = t.revproplist()
+  message = t.revproplist()['svn:log']
+  #
+  # Validate the commit message:
+  if message[:5] != 'issue':
+    sys.stderr.write ("Please begin your commit message with 'issue' characters. message=%s...\n"% \
+    message[:15])
+    sys.exit(1)
+  try:
+    cardIndexNumber =  int(message[5:11])
+  except:
+    sys.stderr.write ("Please begin your commit message with 'issue' characters followed" \
+    +" by a six-digit index. message=%s...\n"%message[:15])
+    sys.exit(1)
+  fileName = message[:11]
+  #
+  # List of card-index
+  client = pysvn.Client()
+  myls = client.ls('file://'+repos+'/'+'/issues/')
+  maxIssue = -1
+  for k in range(len(myls)):
+    maxIssue=max(maxIssue, int(myls[k]['name'].split('/')[-1][5:]))
+  if int(fileName[5:]) > maxIssue+1:
+    sys.stderr.write ("The six-digit index (%d) must be <= %d. message=%s...\n"% \
+    (int(fileName[5:]), maxIssue+1, message[:15]))
+    sys.exit(1)
+  sys.exit(0)
+
+if __name__ == '__main__':
+  if len(sys.argv) < 3:
+    sys.stderr.write("Usage: %s repos txn\n" % (sys.argv[0]))
+  else:
+    main(sys.argv[1], sys.argv[2])
diff --git a/script/set_pythonpath.py b/script/set_pythonpath.py
new file mode 100755
index 0000000..3fddc37
--- /dev/null
+++ b/script/set_pythonpath.py
@@ -0,0 +1,26 @@
+#!/bin/env python3
+""" generation of PYTHONPATH environment variable for PyGan using pth file"""
+
+import os, sys
+mach=os.environ['MACH']
+Compiler = os.environ.get("COMPILER", None) # Compiler selection
+if Compiler == "NVTOOLS":
+  name=os.getcwd() + "/../PyGan/lib/" + mach+"_nvidia" + "/python"
+elif Compiler == "LLVMTOOLS":
+  name=os.getcwd() + "/../PyGan/lib/" + mach+"_llvm" + "/python"
+elif Compiler == "INTELTOOLS":
+  name=os.getcwd() + "/../PyGan/lib/" + mach+"_intel" + "/python"
+else:
+  name=os.getcwd() + "/../PyGan/lib/" + mach + "/python"
+if os.path.isfile(name + "/easy-install.pth"):
+  pythonpath = ""
+  count = 0
+  f = open(name + "/easy-install.pth", 'r')
+  for line in f:
+    count += 1
+    location = "{}".format(name + line.strip()[1:])
+    pythonpath = pythonpath + location + ":"
+  f.close()
+else:
+  pythonpath = name
+print(pythonpath)